Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.31□□□□□ -0.12
VSX2P58304 CNN2P10-201ENST00000443067 918 ntBASIC14.31□□□□□ -0.12
VSX2P58304 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 RPL13AP20-201ENST00000459725 609 ntBASIC14.31□□□□□ -0.12
VSX2P58304 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.31□□□□□ -0.12
VSX2P58304 AP003171.2-201ENST00000528208 925 ntBASIC14.31□□□□□ -0.12
VSX2P58304 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 RN7SL560P-201ENST00000577943 264 ntBASIC14.31□□□□□ -0.12
VSX2P58304 PPY2P-201ENST00000582808 702 ntBASIC14.31□□□□□ -0.12
VSX2P58304 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.31□□□□□ -0.12
VSX2P58304 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 AC073413.1-201ENST00000603927 732 ntBASIC14.31□□□□□ -0.12
VSX2P58304 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 AC020910.5-201ENST00000623668 1865 ntBASIC14.31□□□□□ -0.12
VSX2P58304 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.31□□□□□ -0.12
VSX2P58304 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VSX2P58304 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
VSX2P58304 AC011840.2-201ENST00000563063 1520 ntBASIC14.31□□□□□ -0.12
VSX2P58304 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.3□□□□□ -0.12
VSX2P58304 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 SALL4P5-201ENST00000419001 1760 ntBASIC14.3□□□□□ -0.12
VSX2P58304 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.3□□□□□ -0.12
VSX2P58304 BRWD1P1-201ENST00000401091 371 ntBASIC14.3□□□□□ -0.12
VSX2P58304 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 AC007969.1-201ENST00000433675 447 ntBASIC14.3□□□□□ -0.12
VSX2P58304 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.3□□□□□ -0.12
VSX2P58304 C2orf69P2-201ENST00000562032 1123 ntBASIC14.3□□□□□ -0.12
VSX2P58304 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.3□□□□□ -0.12
VSX2P58304 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.3□□□□□ -0.12
VSX2P58304 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.3□□□□□ -0.12
VSX2P58304 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.3□□□□□ -0.12
VSX2P58304 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VSX2P58304 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms