Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 GNRHR2-203ENST00000581100 1187 ntBASIC13.73□□□□□ -0.21
CLDN20P56880 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 AC145423.3-201ENST00000615987 467 ntBASIC13.73□□□□□ -0.21
CLDN20P56880 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLDN20P56880 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 AC097376.2-205ENST00000610159 5334 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 ACTBP8-201ENST00000403258 1108 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 HLA-K-203ENST00000430151 1046 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN20P56880 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.72□□□□□ -0.21
CLDN20P56880 AC007551.1-201ENST00000457394 519 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CLDN20P56880 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.72□□□□□ -0.21
CLDN20P56880 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN20P56880 SNX29P1-201ENST00000548357 1007 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN20P56880 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.72□□□□□ -0.21
CLDN20P56880 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 AC017083.2-201ENST00000608069 979 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 AC244669.2-201ENST00000612320 853 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 PDIA3P1-201ENST00000471856 1510 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 LRRC59-203ENST00000576448 1531 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
CLDN20P56880 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 KRT8P14-201ENST00000414254 1442 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN20P56880 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN20P56880 AP000845.1-201ENST00000581677 2131 ntBASIC13.72□□□□□ -0.21
CLDN20P56880 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
CLDN20P56880 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms