Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.17□□□□□ -0.14
CASP9P55211 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.17□□□□□ -0.14
CASP9P55211 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.17□□□□□ -0.14
CASP9P55211 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CASP9P55211 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CASP9P55211 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CASP9P55211 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CASP9P55211 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.17□□□□□ -0.14
CASP9P55211 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.17□□□□□ -0.14
CASP9P55211 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 INTS4P2-202ENST00000614726 2019 ntBASIC14.16□□□□□ -0.14
CASP9P55211 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 AC098850.1-201ENST00000419919 790 ntBASIC14.16□□□□□ -0.14
CASP9P55211 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.16□□□□□ -0.14
CASP9P55211 INGX-202ENST00000489074 768 ntBASIC14.16□□□□□ -0.14
CASP9P55211 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.16□□□□□ -0.14
CASP9P55211 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.16□□□□□ -0.14
CASP9P55211 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.16□□□□□ -0.14
CASP9P55211 AC138761.1-201ENST00000584393 385 ntBASIC14.16□□□□□ -0.14
CASP9P55211 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CASP9P55211 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CASP9P55211 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CASP9P55211 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CASP9P55211 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.15□□□□□ -0.14
CASP9P55211 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 RNU1-114P-201ENST00000365297 166 ntBASIC14.15□□□□□ -0.14
CASP9P55211 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.15□□□□□ -0.14
CASP9P55211 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.15□□□□□ -0.14
CASP9P55211 AC134915.1-201ENST00000426461 574 ntBASIC14.15□□□□□ -0.14
CASP9P55211 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CASP9P55211 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms