Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 AC005252.2-201ENST00000624630 1141 ntBASIC13.26□□□□□ -0.29
SLC25A1P53007 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLC25A1P53007 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC25A1P53007 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC25A1P53007 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SLC25A1P53007 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC25A1P53007 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SLC25A1P53007 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SLC25A1P53007 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC25A1P53007 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC25A1P53007 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SLC25A1P53007 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SLC25A1P53007 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 SPTLC1P1-201ENST00000447199 261 ntBASIC13.25□□□□□ -0.29
SLC25A1P53007 GCOM2-201ENST00000509133 1104 ntBASIC13.25□□□□□ -0.29
SLC25A1P53007 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.25□□□□□ -0.29
SLC25A1P53007 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SLC25A1P53007 RNA5SP421-201ENST00000516864 134 ntBASIC13.25□□□□□ -0.29
SLC25A1P53007 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC25A1P53007 AP001063.1-201ENST00000568332 529 ntBASIC13.25□□□□□ -0.29
SLC25A1P53007 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.25□□□□□ -0.29
SLC25A1P53007 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.25□□□□□ -0.29
SLC25A1P53007 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC25A1P53007 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC25A1P53007 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC25A1P53007 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 AC015688.4-201ENST00000580780 1647 ntBASIC13.24□□□□□ -0.29
SLC25A1P53007 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SLC25A1P53007 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SLC25A1P53007 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC25A1P53007 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC25A1P53007 FO681548.1-201ENST00000455617 1132 ntBASIC13.24□□□□□ -0.29
SLC25A1P53007 TMEM198B-204ENST00000484016 896 ntBASIC13.24□□□□□ -0.29
SLC25A1P53007 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC25A1P53007 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC25A1P53007 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC25A1P53007 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC25A1P53007 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SLC25A1P53007 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms