Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 TUBBP5-203ENST00000508529 1334 ntBASIC14.48□□□□□ -0.09
PDX1P52945 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 DPM3-202ENST00000368399 517 ntBASIC14.48□□□□□ -0.09
PDX1P52945 MIR769-201ENST00000390225 118 ntBASIC14.48□□□□□ -0.09
PDX1P52945 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 FXNP2-201ENST00000411625 547 ntBASIC14.48□□□□□ -0.09
PDX1P52945 MESTP3-201ENST00000503460 968 ntBASIC14.48□□□□□ -0.09
PDX1P52945 FTLP10-202ENST00000505798 471 ntBASIC14.48□□□□□ -0.09
PDX1P52945 AC026434.2-201ENST00000506094 1078 ntBASIC14.48□□□□□ -0.09
PDX1P52945 AC245884.6-201ENST00000515672 1067 ntBASIC14.48□□□□□ -0.09
PDX1P52945 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.48□□□□□ -0.09
PDX1P52945 MIR4783-201ENST00000580343 82 ntBASIC14.48□□□□□ -0.09
PDX1P52945 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PDX1P52945 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 CU633904.3-201ENST00000624042 1029 ntBASIC14.48□□□□□ -0.09
PDX1P52945 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 CICP11-201ENST00000434745 2827 ntBASIC14.48□□□□□ -0.09
PDX1P52945 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PDX1P52945 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 AGAP7P-201ENST00000582299 2062 ntBASIC14.48□□□□□ -0.09
PDX1P52945 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 AGAP14-201ENST00000624701 2060 ntBASIC14.48□□□□□ -0.09
PDX1P52945 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDX1P52945 KRT8P29-201ENST00000420409 1371 ntBASIC14.47□□□□□ -0.09
PDX1P52945 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 LINC02228-204ENST00000642115 2962 ntBASIC14.47□□□□□ -0.09
PDX1P52945 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.47□□□□□ -0.09
PDX1P52945 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 ACTG1P2-201ENST00000415776 1125 ntBASIC14.47□□□□□ -0.09
PDX1P52945 HINT2P1-201ENST00000419438 481 ntBASIC14.47□□□□□ -0.09
PDX1P52945 ACTG1P11-201ENST00000425411 1125 ntBASIC14.47□□□□□ -0.09
PDX1P52945 RN7SL11P-201ENST00000471305 293 ntBASIC14.47□□□□□ -0.09
PDX1P52945 RN7SL720P-201ENST00000488178 304 ntBASIC14.47□□□□□ -0.09
PDX1P52945 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.47□□□□□ -0.09
PDX1P52945 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.47□□□□□ -0.09
PDX1P52945 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.47□□□□□ -0.09
PDX1P52945 RN7SL574P-201ENST00000581512 297 ntBASIC14.47□□□□□ -0.09
PDX1P52945 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.47□□□□□ -0.09
PDX1P52945 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PDX1P52945 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
PDX1P52945 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 AL157414.3-201ENST00000624276 1954 ntBASIC14.47□□□□□ -0.09
PDX1P52945 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
PDX1P52945 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDX1P52945 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms