Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.35■□□□□ 0.21
CPT1AP50416 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 PGAM1P5-201ENST00000548011 764 ntBASIC16.35■□□□□ 0.21
CPT1AP50416 AC138894.2-201ENST00000602838 371 ntBASIC16.35■□□□□ 0.21
CPT1AP50416 AC005632.3-201ENST00000605544 308 ntBASIC16.35■□□□□ 0.21
CPT1AP50416 AC242376.2-201ENST00000619355 883 ntBASIC16.35■□□□□ 0.21
CPT1AP50416 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.35■□□□□ 0.21
CPT1AP50416 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.35■□□□□ 0.21
CPT1AP50416 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.35■□□□□ 0.21
CPT1AP50416 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CPT1AP50416 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.35■□□□□ 0.21
CPT1AP50416 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPT1AP50416 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.35■□□□□ 0.21
CPT1AP50416 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.34■□□□□ 0.21
CPT1AP50416 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CPT1AP50416 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CPT1AP50416 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CPT1AP50416 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.34■□□□□ 0.21
CPT1AP50416 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.34■□□□□ 0.21
CPT1AP50416 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.34■□□□□ 0.21
CPT1AP50416 RPSAP15-201ENST00000448168 861 ntBASIC16.34■□□□□ 0.21
CPT1AP50416 DUTP3-201ENST00000450025 415 ntBASIC16.34■□□□□ 0.21
CPT1AP50416 AC079112.1-201ENST00000454972 939 ntBASIC16.34■□□□□ 0.21
CPT1AP50416 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.34■□□□□ 0.21
CPT1AP50416 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.34■□□□□ 0.21
CPT1AP50416 AC003686.1-201ENST00000550956 1034 ntBASIC16.34■□□□□ 0.21
CPT1AP50416 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.34■□□□□ 0.21
CPT1AP50416 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.34■□□□□ 0.21
CPT1AP50416 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.34■□□□□ 0.21
CPT1AP50416 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CPT1AP50416 YRDCP1-201ENST00000621419 643 ntBASIC16.34■□□□□ 0.21
CPT1AP50416 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.34■□□□□ 0.21
CPT1AP50416 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CPT1AP50416 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPT1AP50416 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.34■□□□□ 0.21
CPT1AP50416 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.33■□□□□ 0.21
CPT1AP50416 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CPT1AP50416 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.33■□□□□ 0.21
CPT1AP50416 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPT1AP50416 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CPT1AP50416 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CPT1AP50416 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CPT1AP50416 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 MIR557-201ENST00000385239 98 ntBASIC16.33■□□□□ 0.2
CPT1AP50416 AL512430.1-201ENST00000392575 860 ntBASIC16.33■□□□□ 0.2
CPT1AP50416 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 OR2R1P-201ENST00000441404 914 ntBASIC16.33■□□□□ 0.2
CPT1AP50416 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 DNM1P30-201ENST00000563586 452 ntBASIC16.33■□□□□ 0.2
CPT1AP50416 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CPT1AP50416 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.33■□□□□ 0.2
CPT1AP50416 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.33■□□□□ 0.2
CPT1AP50416 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CPT1AP50416 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
CPT1AP50416 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.33■□□□□ 0.2
CPT1AP50416 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.33■□□□□ 0.2
CPT1AP50416 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.33■□□□□ 0.2
CPT1AP50416 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPT1AP50416 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.33■□□□□ 0.2
CPT1AP50416 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms