Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 MIR600HG-201ENST00000449175 5984 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 AC144831.1-201ENST00000573312 2656 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
GABRA4P48169 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GABRA4P48169 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 AC005740.2-201ENST00000511085 419 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 AL160314.3-201ENST00000556041 767 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 AC013355.1-201ENST00000562625 723 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 RN7SL163P-201ENST00000583100 276 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 MBLAC2-202ENST00000514906 1936 ntBASIC14.05□□□□□ -0.16
GABRA4P48169 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
GABRA4P48169 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
GABRA4P48169 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GABRA4P48169 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.04□□□□□ -0.16
GABRA4P48169 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
GABRA4P48169 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GABRA4P48169 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.04□□□□□ -0.16
GABRA4P48169 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 AC139712.1-201ENST00000378256 1875 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GABRA4P48169 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.04□□□□□ -0.16
GABRA4P48169 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
GABRA4P48169 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.04□□□□□ -0.16
GABRA4P48169 EIF4HP1-201ENST00000453115 687 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA4P48169 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.04□□□□□ -0.16
GABRA4P48169 MARK2P5-201ENST00000507649 634 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.04□□□□□ -0.16
GABRA4P48169 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.04□□□□□ -0.16
GABRA4P48169 ACTG1P17-201ENST00000558391 1119 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 SNORD3B-2-202ENST00000571722 791 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 AC005962.1-201ENST00000584100 773 ntBASIC14.04□□□□□ -0.16
GABRA4P48169 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.04□□□□□ -0.16
GABRA4P48169 AC090164.2-201ENST00000611487 516 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms