Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HNF4AP41235 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HNF4AP41235 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HNF4AP41235 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HNF4AP41235 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.53□□□□□ -0.08
HNF4AP41235 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HNF4AP41235 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HNF4AP41235 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.53□□□□□ -0.08
HNF4AP41235 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.53□□□□□ -0.08
HNF4AP41235 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HNF4AP41235 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HNF4AP41235 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HNF4AP41235 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
HNF4AP41235 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.52□□□□□ -0.08
HNF4AP41235 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HNF4AP41235 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.52□□□□□ -0.08
HNF4AP41235 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
HNF4AP41235 AC005912.2-201ENST00000619492 2400 ntBASIC14.52□□□□□ -0.08
HNF4AP41235 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HNF4AP41235 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.52□□□□□ -0.08
HNF4AP41235 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HNF4AP41235 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 AL512384.1-201ENST00000406683 331 ntBASIC14.52□□□□□ -0.09
HNF4AP41235 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 EIF3FP3-201ENST00000434851 1086 ntBASIC14.52□□□□□ -0.09
HNF4AP41235 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 TTTY23B-201ENST00000442790 549 ntBASIC14.52□□□□□ -0.09
HNF4AP41235 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 AC022137.2-201ENST00000503482 481 ntBASIC14.52□□□□□ -0.09
HNF4AP41235 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.52□□□□□ -0.09
HNF4AP41235 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
HNF4AP41235 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
HNF4AP41235 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HNF4AP41235 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HNF4AP41235 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 AC007191.1-201ENST00000623179 2995 ntBASIC14.52□□□□□ -0.09
HNF4AP41235 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
HNF4AP41235 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 CU639417.3-201ENST00000624240 1404 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HNF4AP41235 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 KRT8P35-201ENST00000483942 1338 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 AC134312.5-201ENST00000568031 1313 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HNF4AP41235 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 COX5BP8-201ENST00000416911 349 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 TMEM14DP-201ENST00000422205 345 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 NME2P1-201ENST00000426182 414 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.51□□□□□ -0.09
HNF4AP41235 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.51□□□□□ -0.09
HNF4AP41235 KRT17P7-201ENST00000451704 1104 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HNF4AP41235 AC026434.2-201ENST00000506094 1078 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 PTP4A1P2-201ENST00000546033 454 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 AC005225.4-201ENST00000557330 545 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.51□□□□□ -0.09
HNF4AP41235 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.51□□□□□ -0.09
HNF4AP41235 MIR5189-201ENST00000577370 114 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 AC012645.4-201ENST00000610691 1061 ntBASIC14.51□□□□□ -0.09
HNF4AP41235 IGHV3-72-202ENST00000621503 303 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms