Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.36■□□□□ 0.21
USP8P40818 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 AC087499.6-201ENST00000411576 835 ntBASIC16.36■□□□□ 0.21
USP8P40818 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.36■□□□□ 0.21
USP8P40818 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.36■□□□□ 0.21
USP8P40818 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.36■□□□□ 0.21
USP8P40818 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.36■□□□□ 0.21
USP8P40818 AL359711.2-201ENST00000563105 872 ntBASIC16.36■□□□□ 0.21
USP8P40818 AC099568.2-201ENST00000609194 695 ntBASIC16.36■□□□□ 0.21
USP8P40818 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.36■□□□□ 0.21
USP8P40818 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
USP8P40818 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
USP8P40818 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
USP8P40818 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
USP8P40818 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 AC002472.2-201ENST00000442739 958 ntBASIC16.35■□□□□ 0.21
USP8P40818 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.35■□□□□ 0.21
USP8P40818 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.35■□□□□ 0.21
USP8P40818 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.35■□□□□ 0.21
USP8P40818 MIR4745-201ENST00000577608 62 ntBASIC16.35■□□□□ 0.21
USP8P40818 SPDYE22P-201ENST00000582158 798 ntBASIC16.35■□□□□ 0.21
USP8P40818 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 BX539320.1-201ENST00000623759 877 ntBASIC16.35■□□□□ 0.21
USP8P40818 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 AC093525.8-201ENST00000624099 1342 ntBASIC16.35■□□□□ 0.21
USP8P40818 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 AL137783.1-201ENST00000623494 1896 ntBASIC16.35■□□□□ 0.21
USP8P40818 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
USP8P40818 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.35■□□□□ 0.21
USP8P40818 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
USP8P40818 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.34■□□□□ 0.21
USP8P40818 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
USP8P40818 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
USP8P40818 MTHFR-210ENST00000641407 2387 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms