Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTNNA1P35221 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.81■□□□□ 0.12
CTNNA1P35221 KRT8P14-201ENST00000414254 1442 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 NUS1P3-201ENST00000423502 862 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 AC089987.1-201ENST00000551654 2209 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CTNNA1P35221 AC023310.3-201ENST00000557027 670 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 AC100756.1-201ENST00000562736 682 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 AC138749.3-201ENST00000567691 622 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTNNA1P35221 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.81■□□□□ 0.12
CTNNA1P35221 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.81■□□□□ 0.12
CTNNA1P35221 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 AC093813.1-201ENST00000605066 256 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 AC116165.1-201ENST00000611806 668 ntBASIC15.81■□□□□ 0.12
CTNNA1P35221 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.8■□□□□ 0.12
CTNNA1P35221 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.8■□□□□ 0.12
CTNNA1P35221 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
CTNNA1P35221 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.8■□□□□ 0.12
CTNNA1P35221 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.8■□□□□ 0.12
CTNNA1P35221 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 DUX4L47-201ENST00000566374 394 ntBASIC15.8■□□□□ 0.12
CTNNA1P35221 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CTNNA1P35221 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CTNNA1P35221 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 AGGF1P1-201ENST00000509500 2073 ntBASIC15.8■□□□□ 0.12
CTNNA1P35221 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CTNNA1P35221 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTNNA1P35221 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CTNNA1P35221 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTNNA1P35221 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.79■□□□□ 0.12
CTNNA1P35221 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTNNA1P35221 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.79■□□□□ 0.12
CTNNA1P35221 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms