Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CAPN3P20807 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 ACA64.2-201ENST00000459014 129 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 RN7SL752P-201ENST00000463779 287 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 AC044860.1-202ENST00000559481 777 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CAPN3P20807 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CAPN3P20807 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 AC090505.1-201ENST00000430515 1834 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 KRT8P14-201ENST00000414254 1442 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 ST20-AS1-201ENST00000560255 4223 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CAPN3P20807 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CAPN3P20807 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 AL512384.1-201ENST00000406683 331 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 MIR1909-201ENST00000411312 80 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.4□□□□□ -0.1
CAPN3P20807 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.4□□□□□ -0.1
CAPN3P20807 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 AC104794.3-201ENST00000566840 1248 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 AL132655.2-201ENST00000596276 594 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
CAPN3P20807 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CAPN3P20807 AL158212.4-201ENST00000624062 1286 ntBASIC14.4□□□□□ -0.1
CAPN3P20807 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN3P20807 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN3P20807 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN3P20807 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms