Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 DLX4-206ENST00000611342 1662 ntBASIC12.53□□□□□ -0.4
CXCL3P19876 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 LINC00567-201ENST00000569854 3409 ntBASIC12.53□□□□□ -0.4
CXCL3P19876 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.52□□□□□ -0.4
CXCL3P19876 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.52□□□□□ -0.4
CXCL3P19876 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.52□□□□□ -0.4
CXCL3P19876 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CXCL3P19876 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CXCL3P19876 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.52□□□□□ -0.4
CXCL3P19876 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 RNPS1P1-201ENST00000507437 918 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 CLEC4GP1-201ENST00000596555 870 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.52□□□□□ -0.41
CXCL3P19876 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 AC008735.5-201ENST00000623544 497 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CXCL3P19876 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CXCL3P19876 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 MKRN5P-201ENST00000445263 1467 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 AC011840.2-201ENST00000563063 1520 ntBASIC12.52□□□□□ -0.41
CXCL3P19876 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CXCL3P19876 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 PCDHB19P-202ENST00000625133 2914 ntBASIC12.51□□□□□ -0.41
CXCL3P19876 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 AC005014.1-201ENST00000432006 2976 ntBASIC12.51□□□□□ -0.41
CXCL3P19876 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CXCL3P19876 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CXCL3P19876 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms