Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 AC087499.6-201ENST00000411576 835 ntBASIC15.41■□□□□ 0.06
BRAFP15056 MEP1AP4-201ENST00000423244 1087 ntBASIC15.41■□□□□ 0.06
BRAFP15056 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 SLED1-202ENST00000512051 380 ntBASIC15.41■□□□□ 0.06
BRAFP15056 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.41■□□□□ 0.06
BRAFP15056 RARRES2P5-201ENST00000564013 466 ntBASIC15.41■□□□□ 0.06
BRAFP15056 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.41■□□□□ 0.06
BRAFP15056 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.41■□□□□ 0.06
BRAFP15056 AC099568.2-201ENST00000609194 695 ntBASIC15.41■□□□□ 0.06
BRAFP15056 AL158212.4-201ENST00000624062 1286 ntBASIC15.41■□□□□ 0.06
BRAFP15056 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
BRAFP15056 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
BRAFP15056 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BRAFP15056 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.41■□□□□ 0.06
BRAFP15056 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
BRAFP15056 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
BRAFP15056 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.4■□□□□ 0.06
BRAFP15056 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
BRAFP15056 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.4■□□□□ 0.06
BRAFP15056 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.4■□□□□ 0.06
BRAFP15056 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.4■□□□□ 0.06
BRAFP15056 DGCR5-201ENST00000399539 862 ntBASIC15.4■□□□□ 0.06
BRAFP15056 TOMM22P5-201ENST00000416399 439 ntBASIC15.4■□□□□ 0.06
BRAFP15056 AC098850.1-201ENST00000419919 790 ntBASIC15.4■□□□□ 0.06
BRAFP15056 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.4■□□□□ 0.06
BRAFP15056 TPT1P11-201ENST00000458482 498 ntBASIC15.4■□□□□ 0.06
BRAFP15056 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
BRAFP15056 AC005225.4-201ENST00000557330 545 ntBASIC15.4■□□□□ 0.06
BRAFP15056 AL596325.1-201ENST00000563991 1082 ntBASIC15.4■□□□□ 0.06
BRAFP15056 WASH4P-201ENST00000564273 1246 ntBASIC15.4■□□□□ 0.06
BRAFP15056 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 AC008494.3-201ENST00000606615 944 ntBASIC15.4■□□□□ 0.06
BRAFP15056 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.4■□□□□ 0.06
BRAFP15056 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BRAFP15056 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
BRAFP15056 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.39■□□□□ 0.05
BRAFP15056 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
BRAFP15056 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.39■□□□□ 0.05
BRAFP15056 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.39■□□□□ 0.05
BRAFP15056 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
BRAFP15056 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
BRAFP15056 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BRAFP15056 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms