Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC130P13994 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC130P13994 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC130P13994 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC130P13994 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC130P13994 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 MTX1P1-201ENST00000440904 838 ntBASIC15.78■□□□□ 0.12
CCDC130P13994 GOLGA2P4-201ENST00000441462 777 ntBASIC15.78■□□□□ 0.12
CCDC130P13994 RPSAP36-202ENST00000494591 1261 ntBASIC15.78■□□□□ 0.12
CCDC130P13994 GCOM2-201ENST00000509133 1104 ntBASIC15.78■□□□□ 0.12
CCDC130P13994 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC130P13994 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC130P13994 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 AP001002.3-201ENST00000623482 206 ntBASIC15.78■□□□□ 0.12
CCDC130P13994 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC130P13994 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC130P13994 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.12
CCDC130P13994 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 PCDHA3-202ENST00000532566 4594 ntBASIC15.77■□□□□ 0.12
CCDC130P13994 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 BRWD1P1-201ENST00000401091 371 ntBASIC15.77■□□□□ 0.12
CCDC130P13994 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC130P13994 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC130P13994 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC130P13994 AC100850.1-201ENST00000506768 649 ntBASIC15.77■□□□□ 0.12
CCDC130P13994 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC130P13994 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC130P13994 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC130P13994 AL136301.1-201ENST00000615830 422 ntBASIC15.77■□□□□ 0.12
CCDC130P13994 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.77■□□□□ 0.11
CCDC130P13994 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC130P13994 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.77■□□□□ 0.11
CCDC130P13994 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC130P13994 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC130P13994 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC130P13994 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC130P13994 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC130P13994 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CCDC130P13994 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC130P13994 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC130P13994 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms