Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.43■□□□□ 0.06
CD48P09326 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 GCOM2-201ENST00000509133 1104 ntBASIC15.43■□□□□ 0.06
CD48P09326 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.43■□□□□ 0.06
CD48P09326 AP003171.2-201ENST00000528208 925 ntBASIC15.43■□□□□ 0.06
CD48P09326 MIR3197-201ENST00000582241 73 ntBASIC15.43■□□□□ 0.06
CD48P09326 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.43■□□□□ 0.06
CD48P09326 AC027307.3-201ENST00000594262 1100 ntBASIC15.43■□□□□ 0.06
CD48P09326 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.43■□□□□ 0.06
CD48P09326 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CD48P09326 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CD48P09326 FKBP4P6-201ENST00000457486 1332 ntBASIC15.43■□□□□ 0.06
CD48P09326 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.43■□□□□ 0.06
CD48P09326 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CD48P09326 MRPL37P1-201ENST00000592451 1337 ntBASIC15.43■□□□□ 0.06
CD48P09326 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 AC006504.5-208ENST00000588784 2401 ntBASIC15.42■□□□□ 0.06
CD48P09326 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 AC005229.1-201ENST00000392885 409 ntBASIC15.42■□□□□ 0.06
CD48P09326 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 AL512384.1-201ENST00000406683 331 ntBASIC15.42■□□□□ 0.06
CD48P09326 TTTY23B-201ENST00000442790 549 ntBASIC15.42■□□□□ 0.06
CD48P09326 AL355864.2-201ENST00000447420 863 ntBASIC15.42■□□□□ 0.06
CD48P09326 AC011495.1-201ENST00000498085 584 ntBASIC15.42■□□□□ 0.06
CD48P09326 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.42■□□□□ 0.06
CD48P09326 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.42■□□□□ 0.06
CD48P09326 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 AC244669.2-201ENST00000612320 853 ntBASIC15.42■□□□□ 0.06
CD48P09326 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CD48P09326 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CD48P09326 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CD48P09326 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms