Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TCRAP04437 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
TCRAP04437 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
TCRAP04437 CICP20-201ENST00000443330 2801 ntBASIC11.4□□□□□ -0.59
TCRAP04437 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TCRAP04437 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.4□□□□□ -0.59
TCRAP04437 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
TCRAP04437 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
TCRAP04437 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TCRAP04437 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.39□□□□□ -0.59
TCRAP04437 SPDYE7P-202ENST00000420373 878 ntBASIC11.39□□□□□ -0.59
TCRAP04437 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 HLA-K-203ENST00000430151 1046 ntBASIC11.39□□□□□ -0.59
TCRAP04437 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.39□□□□□ -0.59
TCRAP04437 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 AC093520.2-201ENST00000561830 333 ntBASIC11.39□□□□□ -0.59
TCRAP04437 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.39□□□□□ -0.59
TCRAP04437 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.39□□□□□ -0.59
TCRAP04437 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 AC004461.2-201ENST00000629517 803 ntBASIC11.39□□□□□ -0.59
TCRAP04437 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.39□□□□□ -0.59
TCRAP04437 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.39□□□□□ -0.59
TCRAP04437 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
TCRAP04437 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TCRAP04437 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.38□□□□□ -0.59
TCRAP04437 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TCRAP04437 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.38□□□□□ -0.59
TCRAP04437 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.38□□□□□ -0.59
TCRAP04437 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TCRAP04437 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TCRAP04437 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TCRAP04437 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.38□□□□□ -0.59
TCRAP04437 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms