Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
P04436 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.61□□□□□ -0.23
P04436 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
P04436 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.61□□□□□ -0.23
P04436 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.61□□□□□ -0.23
P04436 AC099548.2-209ENST00000480264 625 ntBASIC13.61□□□□□ -0.23
P04436 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.61□□□□□ -0.23
P04436 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.61□□□□□ -0.23
P04436 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.61□□□□□ -0.23
P04436 AC008825.2-201ENST00000603374 718 ntBASIC13.61□□□□□ -0.23
P04436 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.61□□□□□ -0.23
P04436 GPR182-203ENST00000622922 591 ntBASIC13.61□□□□□ -0.23
P04436 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
P04436 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.61□□□□□ -0.23
P04436 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.61□□□□□ -0.23
P04436 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.61□□□□□ -0.23
P04436 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
P04436 SHC1P1-201ENST00000425230 1745 ntBASIC13.61□□□□□ -0.23
P04436 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04436 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.61□□□□□ -0.23
P04436 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.61□□□□□ -0.23
P04436 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.61□□□□□ -0.23
P04436 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
P04436 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.6□□□□□ -0.23
P04436 AC126177.1-201ENST00000547829 2218 ntBASIC13.6□□□□□ -0.23
P04436 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.6□□□□□ -0.23
P04436 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
P04436 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.6□□□□□ -0.23
P04436 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.6□□□□□ -0.23
P04436 AC004898.1-201ENST00000451057 766 ntBASIC13.6□□□□□ -0.23
P04436 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.6□□□□□ -0.23
P04436 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.6□□□□□ -0.23
P04436 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.6□□□□□ -0.23
P04436 AC100827.2-201ENST00000563214 1194 ntBASIC13.6□□□□□ -0.23
P04436 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.6□□□□□ -0.23
P04436 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.6□□□□□ -0.23
P04436 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 AC244093.1-201ENST00000610837 814 ntBASIC13.6□□□□□ -0.23
P04436 MIR6787-201ENST00000616675 61 ntBASIC13.6□□□□□ -0.23
P04436 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P04436 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.6□□□□□ -0.23
P04436 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
P04436 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04436 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
P04436 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
P04436 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
P04436 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04436 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.59□□□□□ -0.23
P04436 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.59□□□□□ -0.23
P04436 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.59□□□□□ -0.23
P04436 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04436 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04436 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms