Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 YRDCP1-201ENST00000621419 643 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CHRNA1P02708 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 AC092135.3-201ENST00000624151 1846 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRNA1P02708 AC091951.1-201ENST00000512854 2465 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRNA1P02708 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CHRNA1P02708 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 TSPY25P-201ENST00000429463 745 ntBASIC16.04■□□□□ 0.16
CHRNA1P02708 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 OR2R1P-201ENST00000441404 914 ntBASIC16.04■□□□□ 0.16
CHRNA1P02708 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.04■□□□□ 0.16
CHRNA1P02708 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.04■□□□□ 0.16
CHRNA1P02708 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.04■□□□□ 0.16
CHRNA1P02708 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHRNA1P02708 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA1P02708 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHRNA1P02708 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CHRNA1P02708 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHRNA1P02708 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHRNA1P02708 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.03■□□□□ 0.16
CHRNA1P02708 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.03■□□□□ 0.16
CHRNA1P02708 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms