Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 AP002353.1-201ENST00000528257 1599 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 PCDHA12-202ENST00000613593 2588 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 SCARNA12-201ENST00000459155 270 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 AC023906.1-201ENST00000486386 453 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 AC090136.2-201ENST00000517809 420 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 MIR5001-201ENST00000580185 100 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 MIR6816-201ENST00000620368 66 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 AC105250.1-201ENST00000509378 2057 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 AL603832.2-201ENST00000566195 2125 ntBASIC16.69■□□□□ 0.26
ALDH1A1P00352 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALDH1A1P00352 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.69■□□□□ 0.26
ALDH1A1P00352 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AL590440.2-201ENST00000641973 1595 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AL109809.1-201ENST00000418979 1367 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 KRT18P46-201ENST00000435568 1279 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 NAV1-210ENST00000593583 726 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 PTPN20CP-201ENST00000614090 920 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 CICP13-201ENST00000422015 2789 ntBASIC16.68■□□□□ 0.26
ALDH1A1P00352 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.68■□□□□ 0.26
ALDH1A1P00352 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ALDH1A1P00352 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
ALDH1A1P00352 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ALDH1A1P00352 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms