Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
UPK1BO75841 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK1BO75841 MIR4497-201ENST00000583208 89 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 MTDHP3-201ENST00000594186 672 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 MIR6074-201ENST00000612054 107 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 AC027369.3-201ENST00000530465 3707 ntBASIC12.98□□□□□ -0.33
UPK1BO75841 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK1BO75841 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK1BO75841 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK1BO75841 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 AGGF1P10-201ENST00000635005 2191 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK1BO75841 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UPK1BO75841 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AC073621.1-201ENST00000392730 636 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.97□□□□□ -0.33
UPK1BO75841 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UPK1BO75841 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK1BO75841 TSSC2-201ENST00000450217 709 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AC136632.2-201ENST00000512891 861 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK1BO75841 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK1BO75841 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 LINC00567-201ENST00000569854 3409 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UPK1BO75841 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms