Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC28A2O43868 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC28A2O43868 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SLC28A2O43868 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
SLC28A2O43868 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC28A2O43868 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A2O43868 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AC092978.1-202ENST00000637590 1327 ntBASIC14.46□□□□□ -0.09
SLC28A2O43868 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SLC28A2O43868 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A2O43868 BX284668.4-201ENST00000453917 508 ntBASIC14.46□□□□□ -0.09
SLC28A2O43868 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 AC106760.1-201ENST00000508690 800 ntBASIC14.46□□□□□ -0.09
SLC28A2O43868 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A2O43868 BRI3BPP1-201ENST00000594224 787 ntBASIC14.46□□□□□ -0.09
SLC28A2O43868 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 AC138627.1-207ENST00000641560 1006 ntBASIC14.46□□□□□ -0.09
SLC28A2O43868 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A2O43868 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A2O43868 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A2O43868 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A2O43868 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A2O43868 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A2O43868 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC28A2O43868 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SLC28A2O43868 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC28A2O43868 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A2O43868 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.45□□□□□ -0.1
SLC28A2O43868 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC091046.1-201ENST00000331871 207 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 AL133267.1-201ENST00000398220 340 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 GHSR-202ENST00000427970 912 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A2O43868 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A2O43868 AC012441.1-201ENST00000446669 685 ntBASIC14.45□□□□□ -0.1
SLC28A2O43868 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A2O43868 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A2O43868 EEF1DP1-201ENST00000585891 896 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms