Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HOXA3O43365 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 Z97180.1-201ENST00000445173 988 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 AL133466.1-201ENST00000447582 150 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 RN7SL11P-201ENST00000471305 293 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.02□□□□□ -0.49
HOXA3O43365 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.02□□□□□ -0.49
HOXA3O43365 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.02□□□□□ -0.49
HOXA3O43365 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.02□□□□□ -0.49
HOXA3O43365 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.02□□□□□ -0.49
HOXA3O43365 CU633904.3-201ENST00000624042 1029 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.02□□□□□ -0.49
HOXA3O43365 AC138627.1-207ENST00000641560 1006 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 AP002414.2-201ENST00000591780 3365 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 AC126335.2-201ENST00000623362 4637 ntBASIC12.02□□□□□ -0.49
HOXA3O43365 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HOXA3O43365 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HOXA3O43365 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.02□□□□□ -0.49
HOXA3O43365 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 FAM45BP-202ENST00000592932 1624 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
HOXA3O43365 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 RN7SKP175-201ENST00000408472 289 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 AC011742.3-201ENST00000439053 820 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 SPTLC1P5-201ENST00000450718 252 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.01□□□□□ -0.49
HOXA3O43365 AC245884.6-201ENST00000515672 1067 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 AC079328.1-201ENST00000560358 952 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 AC100827.2-201ENST00000563214 1194 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.01□□□□□ -0.49
HOXA3O43365 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.01□□□□□ -0.49
HOXA3O43365 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.01□□□□□ -0.49
HOXA3O43365 AL358472.3-201ENST00000608147 415 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 AP001505.2-201ENST00000616815 443 ntBASIC12.01□□□□□ -0.49
HOXA3O43365 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.01□□□□□ -0.49
HOXA3O43365 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HOXA3O43365 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HOXA3O43365 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms