Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CHD2O14647 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD2O14647 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD2O14647 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CHD2O14647 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD2O14647 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.96■□□□□ 0.79
CHD2O14647 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD2O14647 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.96■□□□□ 0.79
CHD2O14647 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD2O14647 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD2O14647 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD2O14647 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CHD2O14647 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 AP000354.1-201ENST00000396982 456 ntBASIC19.95■□□□□ 0.78
CHD2O14647 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 FAM21EP-201ENST00000417804 985 ntBASIC19.95■□□□□ 0.78
CHD2O14647 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD2O14647 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 AC092573.1-201ENST00000433054 884 ntBASIC19.95■□□□□ 0.78
CHD2O14647 CDCA4P4-201ENST00000435216 680 ntBASIC19.95■□□□□ 0.78
CHD2O14647 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 ASS1P2-201ENST00000439895 1223 ntBASIC19.95■□□□□ 0.78
CHD2O14647 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD2O14647 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 EEF1GP8-201ENST00000506566 1154 ntBASIC19.95■□□□□ 0.78
CHD2O14647 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD2O14647 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD2O14647 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD2O14647 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CHD2O14647 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHD2O14647 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD2O14647 PGAM1P11-201ENST00000416729 680 ntBASIC19.95■□□□□ 0.78
CHD2O14647 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD2O14647 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD2O14647 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD2O14647 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD2O14647 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD2O14647 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHD2O14647 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 OR7E115P-201ENST00000382617 1024 ntBASIC19.94■□□□□ 0.78
CHD2O14647 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD2O14647 RN7SKP155-201ENST00000516031 288 ntBASIC19.94■□□□□ 0.78
CHD2O14647 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD2O14647 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD2O14647 PRMT1P1-201ENST00000604252 1009 ntBASIC19.94■□□□□ 0.78
CHD2O14647 AC233280.19-201ENST00000633223 136 ntBASIC19.94■□□□□ 0.78
CHD2O14647 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD2O14647 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD2O14647 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD2O14647 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 AL391005.1-201ENST00000623953 2435 ntBASIC19.93■□□□□ 0.78
CHD2O14647 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CHD2O14647 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD2O14647 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms