Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 AC022616.1-201ENST00000518688 554 ntBASIC15.86■□□□□ 0.13
RCCD1A6NED2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 AL136172.1-201ENST00000598590 1394 ntBASIC15.86■□□□□ 0.13
RCCD1A6NED2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RCCD1A6NED2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.86■□□□□ 0.13
RCCD1A6NED2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC090643.2-201ENST00000623442 2029 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC022144.1-201ENST00000602255 1580 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 MRPS18AP1-201ENST00000414458 589 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC067863.1-201ENST00000494933 530 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 IGHV3-42-201ENST00000520410 361 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC120045.2-201ENST00000567334 178 ntBASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.85■□□□□ 0.13
RCCD1A6NED2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCCD1A6NED2 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FAM86GP-201ENST00000448322 971 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 AC131206.1-201ENST00000538078 1211 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 AL133445.2-201ENST00000611191 527 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 AL390754.1-201ENST00000619088 582 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms