Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MBD3L3A6NE82 LINC00554-201ENST00000564841 3011 ntBASIC12.97□□□□□ -0.33
MBD3L3A6NE82 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 RN7SL258P-201ENST00000478664 300 ntBASIC12.96□□□□□ -0.33
MBD3L3A6NE82 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC012044.1-201ENST00000603431 297 ntBASIC12.96□□□□□ -0.33
MBD3L3A6NE82 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.96□□□□□ -0.33
MBD3L3A6NE82 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC092299.1-201ENST00000632679 757 ntBASIC12.96□□□□□ -0.33
MBD3L3A6NE82 AC128714.1-201ENST00000637035 887 ntBASIC12.96□□□□□ -0.33
MBD3L3A6NE82 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MBD3L3A6NE82 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MBD3L3A6NE82 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 FRMPD2B-201ENST00000431305 1347 ntBASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 EEF1DP6-201ENST00000449232 372 ntBASIC12.95□□□□□ -0.34
MBD3L3A6NE82 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.95□□□□□ -0.34
MBD3L3A6NE82 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.95□□□□□ -0.34
MBD3L3A6NE82 AL353726.2-201ENST00000623259 884 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms