Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13□□□□□ -0.33
SHISA3A0PJX4 HTR5BP-201ENST00000430851 1154 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 AL353779.1-201ENST00000434793 351 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13□□□□□ -0.33
SHISA3A0PJX4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AC010336.2-201ENST00000564226 506 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SHISA3A0PJX4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AC023511.2-201ENST00000618803 211 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AL109936.8-201ENST00000641772 604 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
SHISA3A0PJX4 AL365209.1-201ENST00000624418 6473 ntBASIC13□□□□□ -0.33
SHISA3A0PJX4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SHISA3A0PJX4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SHISA3A0PJX4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 TUBB3P1-201ENST00000405796 1332 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 MKNK2P1-201ENST00000437526 628 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AC004461.2-201ENST00000629517 803 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AL513210.1-201ENST00000629608 234 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AC097376.2-205ENST00000610159 5334 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AGAP12P-201ENST00000585227 2359 ntBASIC12.99□□□□□ -0.33
SHISA3A0PJX4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SHISA3A0PJX4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SHISA3A0PJX4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms