Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX49Q9Y6V7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX49Q9Y6V7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 C9orf163-202ENST00000624034 2573 ntBASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DDX49Q9Y6V7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 ABCB10P4-201ENST00000566803 2184 ntBASIC27.24■■□□□ 1.95
DDX49Q9Y6V7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DDX49Q9Y6V7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX49Q9Y6V7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DDX49Q9Y6V7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.2■■□□□ 1.95
DDX49Q9Y6V7 CLDN5-201ENST00000403084 2357 ntBASIC27.2■■□□□ 1.95
DDX49Q9Y6V7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
DDX49Q9Y6V7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 AC120024.1-201ENST00000562672 995 ntBASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
DDX49Q9Y6V7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX49Q9Y6V7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 Z92544.1-202ENST00000571933 1220 ntBASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms