Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCA3PQ9Y6N3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 UNC93B8-201ENST00000511903 705 ntBASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 SNX5-217ENST00000606557 1087 ntBASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLCA3PQ9Y6N3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.52■■□□□ 1.03
CLCA3PQ9Y6N3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 AC004448.1-201ENST00000458332 883 ntBASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCA3PQ9Y6N3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 AC131274.2-201ENST00000580697 1507 ntBASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 KRT16P3-201ENST00000439127 1283 ntBASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 AC010997.5-201ENST00000609182 354 ntBASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCA3PQ9Y6N3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCA3PQ9Y6N3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 AL161729.1-201ENST00000604104 1402 ntBASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 AL356441.2-201ENST00000443009 864 ntBASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLCA3PQ9Y6N3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 AC133561.1-201ENST00000568600 2415 ntBASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.47■■□□□ 1.03
CLCA3PQ9Y6N3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 MIR6722-201ENST00000617286 78 ntBASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLCA3PQ9Y6N3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
CLCA3PQ9Y6N3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms