Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCFC2Q9Y5Z7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HCFC2Q9Y5Z7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCFC2Q9Y5Z7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCFC2Q9Y5Z7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
HCFC2Q9Y5Z7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 AC241377.3-202ENST00000626088 1088 ntBASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 AC241585.3-202ENST00000628937 1088 ntBASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 AC245100.8-202ENST00000629247 1058 ntBASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
HCFC2Q9Y5Z7 AC092803.2-201ENST00000564287 1899 ntBASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 SLC6A10P-202ENST00000431994 2058 ntBASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.17■■□□□ 1.46
HCFC2Q9Y5Z7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HCFC2Q9Y5Z7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HCFC2Q9Y5Z7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.16■■□□□ 1.46
HCFC2Q9Y5Z7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.16■■□□□ 1.46
HCFC2Q9Y5Z7 AL022069.1-201ENST00000568025 1636 ntBASIC24.16■■□□□ 1.46
HCFC2Q9Y5Z7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HCFC2Q9Y5Z7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
HCFC2Q9Y5Z7 AC006455.2-201ENST00000429931 906 ntBASIC24.15■■□□□ 1.46
HCFC2Q9Y5Z7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HCFC2Q9Y5Z7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
HCFC2Q9Y5Z7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
HCFC2Q9Y5Z7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 AC233992.3-201ENST00000607491 485 ntBASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HCFC2Q9Y5Z7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.13■■□□□ 1.45
HCFC2Q9Y5Z7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 BX842568.3-201ENST00000418104 571 ntBASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.12■■□□□ 1.45
HCFC2Q9Y5Z7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 MIR6089-201ENST00000616698 64 ntBASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 AC009086.3-201ENST00000623486 1008 ntBASIC24.11■■□□□ 1.45
HCFC2Q9Y5Z7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 MIR3181-201ENST00000578512 73 ntBASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HCFC2Q9Y5Z7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms