Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA9Q9Y5G4 ERN1-208ENST00000606895 2068 ntBASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 AC005703.6-201ENST00000623265 1329 ntBASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHGA9Q9Y5G4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 AC092171.4-201ENST00000609130 632 ntBASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 MIR5787-201ENST00000611784 55 ntBASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 AC092666.2-201ENST00000613287 246 ntBASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGA9Q9Y5G4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 AC096887.2-201ENST00000623443 1957 ntBASIC21.34■■□□□ 1.01
PCDHGA9Q9Y5G4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 AL136967.2-201ENST00000623968 743 ntBASIC21.33■■□□□ 1.01
PCDHGA9Q9Y5G4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA9Q9Y5G4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA9Q9Y5G4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA9Q9Y5G4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 MIR939-201ENST00000401314 82 ntBASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 AC105265.2-201ENST00000467189 838 ntBASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHGA9Q9Y5G4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 AF213884.3-201ENST00000563833 479 ntBASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 AC104564.3-201ENST00000582367 638 ntBASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA9Q9Y5G4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 AC091305.1-201ENST00000479476 895 ntBASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA9Q9Y5G4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 SYT6-210ENST00000641643 1587 ntBASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 907.5 ms