Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 DUX4L7-201ENST00000630678 1275 ntBASIC23.29■■□□□ 1.32
SIT1Q9Y3P8 DUX4L5-201ENST00000630834 1275 ntBASIC23.29■■□□□ 1.32
SIT1Q9Y3P8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SIT1Q9Y3P8 AC096887.2-201ENST00000623443 1957 ntBASIC23.29■■□□□ 1.32
SIT1Q9Y3P8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 AC006455.2-201ENST00000429931 906 ntBASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.28■■□□□ 1.32
SIT1Q9Y3P8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 AC009086.3-201ENST00000623486 1008 ntBASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.27■■□□□ 1.32
SIT1Q9Y3P8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SIT1Q9Y3P8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SIT1Q9Y3P8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIT1Q9Y3P8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 AC123595.1-201ENST00000440769 1046 ntBASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 TSPY26P-201ENST00000476365 1326 ntBASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SIT1Q9Y3P8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 AL358852.1-201ENST00000623174 1268 ntBASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SIT1Q9Y3P8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 ERN1-208ENST00000606895 2068 ntBASIC23.21■■□□□ 1.31
SIT1Q9Y3P8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 AC027612.3-201ENST00000413684 1047 ntBASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.2■■□□□ 1.3
SIT1Q9Y3P8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SIT1Q9Y3P8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SIT1Q9Y3P8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms