Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NINLQ9Y2I6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NINLQ9Y2I6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.55■■■□□ 2.64
NINLQ9Y2I6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
NINLQ9Y2I6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NINLQ9Y2I6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NINLQ9Y2I6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
NINLQ9Y2I6 AC142381.3-201ENST00000568208 1670 ntBASIC31.52■■■□□ 2.64
NINLQ9Y2I6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NINLQ9Y2I6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 AC106739.1-201ENST00000617035 715 ntBASIC31.51■■■□□ 2.63
NINLQ9Y2I6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NINLQ9Y2I6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NINLQ9Y2I6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NINLQ9Y2I6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.49■■■□□ 2.63
NINLQ9Y2I6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NINLQ9Y2I6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.49■■■□□ 2.63
NINLQ9Y2I6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.49■■■□□ 2.63
NINLQ9Y2I6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NINLQ9Y2I6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.48■■■□□ 2.63
NINLQ9Y2I6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.48■■■□□ 2.63
NINLQ9Y2I6 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.48■■■□□ 2.63
NINLQ9Y2I6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NINLQ9Y2I6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 AC009102.2-201ENST00000606772 1639 ntBASIC31.47■■■□□ 2.63
NINLQ9Y2I6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NINLQ9Y2I6 C17orf82-201ENST00000623772 1530 ntBASIC31.47■■■□□ 2.63
NINLQ9Y2I6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NINLQ9Y2I6 AC026271.2-201ENST00000428091 497 ntBASIC31.45■■■□□ 2.63
NINLQ9Y2I6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NINLQ9Y2I6 ALDH1A3-203ENST00000557963 1670 ntBASIC31.44■■■□□ 2.62
NINLQ9Y2I6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NINLQ9Y2I6 DUX4L19-201ENST00000557448 1267 ntBASIC31.44■■■□□ 2.62
NINLQ9Y2I6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.44■■■□□ 2.62
NINLQ9Y2I6 AC092171.4-201ENST00000609130 632 ntBASIC31.44■■■□□ 2.62
NINLQ9Y2I6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.44■■■□□ 2.62
NINLQ9Y2I6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.43■■■□□ 2.62
NINLQ9Y2I6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NINLQ9Y2I6 AC135279.3-201ENST00000610945 1311 ntBASIC31.42■■■□□ 2.62
NINLQ9Y2I6 UNC93B3-201ENST00000308076 687 ntBASIC31.42■■■□□ 2.62
NINLQ9Y2I6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NINLQ9Y2I6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NINLQ9Y2I6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NINLQ9Y2I6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms