Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SSR3Q9UNL2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR3Q9UNL2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.37■□□□□ 0.85
SSR3Q9UNL2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SSR3Q9UNL2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR3Q9UNL2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.34■□□□□ 0.85
SSR3Q9UNL2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 AL162393.1-201ENST00000437852 946 ntBASIC20.34■□□□□ 0.85
SSR3Q9UNL2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SSR3Q9UNL2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SSR3Q9UNL2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SSR3Q9UNL2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSR3Q9UNL2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR3Q9UNL2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSR3Q9UNL2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.33■□□□□ 0.84
SSR3Q9UNL2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR3Q9UNL2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR3Q9UNL2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR3Q9UNL2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms