Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.12■■■□□ 2.57
PHRF1Q9P1Y6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PHRF1Q9P1Y6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PHRF1Q9P1Y6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
PHRF1Q9P1Y6 AC034268.1-201ENST00000441047 882 ntBASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PHRF1Q9P1Y6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.08■■■□□ 2.57
PHRF1Q9P1Y6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 RARRES2P11-201ENST00000635158 484 ntBASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PHRF1Q9P1Y6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.06■■■□□ 2.56
PHRF1Q9P1Y6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.05■■■□□ 2.56
PHRF1Q9P1Y6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.05■■■□□ 2.56
PHRF1Q9P1Y6 AC092437.1-201ENST00000624794 1048 ntBASIC31.05■■■□□ 2.56
PHRF1Q9P1Y6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.05■■■□□ 2.56
PHRF1Q9P1Y6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PHRF1Q9P1Y6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 BX842568.3-201ENST00000418104 571 ntBASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 AC241377.3-202ENST00000626088 1088 ntBASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 AC241585.3-202ENST00000628937 1088 ntBASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 AC245100.8-202ENST00000629247 1058 ntBASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 AL121749.1-202ENST00000609313 2153 ntBASIC31.04■■■□□ 2.56
PHRF1Q9P1Y6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 AC027612.3-201ENST00000413684 1047 ntBASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PHRF1Q9P1Y6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.02■■■□□ 2.56
PHRF1Q9P1Y6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
PHRF1Q9P1Y6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.01■■■□□ 2.56
PHRF1Q9P1Y6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L2-201ENST00000561772 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 AC233992.3-201ENST00000607491 485 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L6-201ENST00000626483 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L1-201ENST00000627662 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L8-201ENST00000629013 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L3-201ENST00000630187 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L7-201ENST00000630678 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 DUX4L5-201ENST00000630834 1275 ntBASIC31.01■■■□□ 2.55
PHRF1Q9P1Y6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31■■■□□ 2.55
PHRF1Q9P1Y6 AC009086.3-201ENST00000623486 1008 ntBASIC31■■■□□ 2.55
PHRF1Q9P1Y6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31■■■□□ 2.55
PHRF1Q9P1Y6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
PHRF1Q9P1Y6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
PHRF1Q9P1Y6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms