Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 AC006455.2-201ENST00000429931 906 ntBASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.43■■■□□ 2.3
TFCP2L1Q9NZI6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
TFCP2L1Q9NZI6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TFCP2L1Q9NZI6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.42■■■□□ 2.3
TFCP2L1Q9NZI6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.42■■■□□ 2.3
TFCP2L1Q9NZI6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
TFCP2L1Q9NZI6 C17orf82-201ENST00000623772 1530 ntBASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 AC097639.1-201ENST00000565519 1891 ntBASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
TFCP2L1Q9NZI6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 MIR3181-201ENST00000578512 73 ntBASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 AC126544.1-201ENST00000580842 1059 ntBASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TFCP2L1Q9NZI6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.39■■■□□ 2.3
TFCP2L1Q9NZI6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.38■■■□□ 2.29
TFCP2L1Q9NZI6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.38■■■□□ 2.29
TFCP2L1Q9NZI6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TFCP2L1Q9NZI6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TFCP2L1Q9NZI6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TFCP2L1Q9NZI6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.37■■■□□ 2.29
TFCP2L1Q9NZI6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.37■■■□□ 2.29
TFCP2L1Q9NZI6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TFCP2L1Q9NZI6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
TFCP2L1Q9NZI6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TFCP2L1Q9NZI6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TFCP2L1Q9NZI6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.36■■■□□ 2.29
TFCP2L1Q9NZI6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.36■■■□□ 2.29
TFCP2L1Q9NZI6 AC131274.2-201ENST00000580697 1507 ntBASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 AC009086.3-201ENST00000623486 1008 ntBASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 TSPY26P-201ENST00000476365 1326 ntBASIC29.35■■■□□ 2.29
TFCP2L1Q9NZI6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 HLA-L-209ENST00000420110 1011 ntBASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 AC123595.1-201ENST00000440769 1046 ntBASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TFCP2L1Q9NZI6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
TFCP2L1Q9NZI6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 AC027612.3-201ENST00000413684 1047 ntBASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 AL358852.1-201ENST00000623174 1268 ntBASIC29.32■■■□□ 2.28
TFCP2L1Q9NZI6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
TFCP2L1Q9NZI6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.31■■■□□ 2.28
TFCP2L1Q9NZI6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
TFCP2L1Q9NZI6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.31■■■□□ 2.28
TFCP2L1Q9NZI6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TFCP2L1Q9NZI6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms