Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALYQ9NYX4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CALYQ9NYX4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALYQ9NYX4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALYQ9NYX4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CALYQ9NYX4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.9■□□□□ 0.62
CALYQ9NYX4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.9■□□□□ 0.62
CALYQ9NYX4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CALYQ9NYX4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CALYQ9NYX4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALYQ9NYX4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.89■□□□□ 0.62
CALYQ9NYX4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.89■□□□□ 0.62
CALYQ9NYX4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CALYQ9NYX4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.89■□□□□ 0.61
CALYQ9NYX4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.89■□□□□ 0.61
CALYQ9NYX4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.89■□□□□ 0.61
CALYQ9NYX4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CALYQ9NYX4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CALYQ9NYX4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALYQ9NYX4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALYQ9NYX4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALYQ9NYX4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.88■□□□□ 0.61
CALYQ9NYX4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALYQ9NYX4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALYQ9NYX4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALYQ9NYX4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALYQ9NYX4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.87■□□□□ 0.61
CALYQ9NYX4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CALYQ9NYX4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALYQ9NYX4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALYQ9NYX4 ALDH1A3-203ENST00000557963 1670 ntBASIC18.87■□□□□ 0.61
CALYQ9NYX4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.87■□□□□ 0.61
CALYQ9NYX4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CALYQ9NYX4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CALYQ9NYX4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CALYQ9NYX4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.85■□□□□ 0.61
CALYQ9NYX4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.85■□□□□ 0.61
CALYQ9NYX4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 AC004448.1-201ENST00000458332 883 ntBASIC18.85■□□□□ 0.61
CALYQ9NYX4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.85■□□□□ 0.61
CALYQ9NYX4 AC137630.3-201ENST00000607245 391 ntBASIC18.85■□□□□ 0.61
CALYQ9NYX4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CALYQ9NYX4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CALYQ9NYX4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CALYQ9NYX4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.84■□□□□ 0.61
CALYQ9NYX4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALYQ9NYX4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CALYQ9NYX4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.83■□□□□ 0.61
CALYQ9NYX4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.83■□□□□ 0.61
CALYQ9NYX4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALYQ9NYX4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.83■□□□□ 0.6
CALYQ9NYX4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.83■□□□□ 0.6
CALYQ9NYX4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALYQ9NYX4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALYQ9NYX4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALYQ9NYX4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms