Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.96■□□□□ 0.95
RYDENQ9NUL5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
RYDENQ9NUL5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RYDENQ9NUL5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RYDENQ9NUL5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RYDENQ9NUL5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RYDENQ9NUL5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RYDENQ9NUL5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RYDENQ9NUL5 AC008406.3-201ENST00000620001 1374 ntBASIC20.95■□□□□ 0.94
RYDENQ9NUL5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.95■□□□□ 0.94
RYDENQ9NUL5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RYDENQ9NUL5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RYDENQ9NUL5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RYDENQ9NUL5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RYDENQ9NUL5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RYDENQ9NUL5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RYDENQ9NUL5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 DUX4L19-201ENST00000557448 1267 ntBASIC20.93■□□□□ 0.94
RYDENQ9NUL5 AL512631.2-201ENST00000604634 923 ntBASIC20.93■□□□□ 0.94
RYDENQ9NUL5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RYDENQ9NUL5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RYDENQ9NUL5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 AC131281.2-201ENST00000520478 145 ntBASIC20.91■□□□□ 0.94
RYDENQ9NUL5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RYDENQ9NUL5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 AC241377.3-202ENST00000626088 1088 ntBASIC20.9■□□□□ 0.94
RYDENQ9NUL5 AC241585.3-202ENST00000628937 1088 ntBASIC20.9■□□□□ 0.94
RYDENQ9NUL5 AC245100.8-202ENST00000629247 1058 ntBASIC20.9■□□□□ 0.94
RYDENQ9NUL5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RYDENQ9NUL5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.89■□□□□ 0.94
RYDENQ9NUL5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RYDENQ9NUL5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.89■□□□□ 0.93
RYDENQ9NUL5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RYDENQ9NUL5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RYDENQ9NUL5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RYDENQ9NUL5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RYDENQ9NUL5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RYDENQ9NUL5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms