Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BRMS1Q9HCU9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.34■■□□□ 1.81
BRMS1Q9HCU9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRMS1Q9HCU9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 AC004448.1-201ENST00000458332 883 ntBASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRMS1Q9HCU9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRMS1Q9HCU9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.32■■□□□ 1.8
BRMS1Q9HCU9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.31■■□□□ 1.8
BRMS1Q9HCU9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 KRT125P-201ENST00000546827 989 ntBASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 Z92544.1-202ENST00000571933 1220 ntBASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
BRMS1Q9HCU9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 AC021242.3-201ENST00000607598 1377 ntBASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.29■■□□□ 1.8
BRMS1Q9HCU9 ALDH1A3-203ENST00000557963 1670 ntBASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
BRMS1Q9HCU9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 AC009299.2-201ENST00000482477 511 ntBASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 AL451085.2-201ENST00000605085 799 ntBASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRMS1Q9HCU9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 SNX5-217ENST00000606557 1087 ntBASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
BRMS1Q9HCU9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRMS1Q9HCU9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.24■■□□□ 1.79
BRMS1Q9HCU9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.24■■□□□ 1.79
BRMS1Q9HCU9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRMS1Q9HCU9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
BRMS1Q9HCU9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.24■■□□□ 1.79
BRMS1Q9HCU9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms