Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BRF2Q9HAW0 AC103834.1-201ENST00000520383 144 ntBASIC21.91■■□□□ 1.1
BRF2Q9HAW0 ALDH1A3-203ENST00000557963 1670 ntBASIC21.91■■□□□ 1.1
BRF2Q9HAW0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BRF2Q9HAW0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.89■■□□□ 1.1
BRF2Q9HAW0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
BRF2Q9HAW0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BRF2Q9HAW0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 YBX1P4-201ENST00000392794 808 ntBASIC21.88■■□□□ 1.09
BRF2Q9HAW0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BRF2Q9HAW0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BRF2Q9HAW0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 AC103724.3-201ENST00000564481 992 ntBASIC21.86■■□□□ 1.09
BRF2Q9HAW0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BRF2Q9HAW0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 AC004448.1-201ENST00000458332 883 ntBASIC21.85■■□□□ 1.09
BRF2Q9HAW0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.85■■□□□ 1.09
BRF2Q9HAW0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
BRF2Q9HAW0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BRF2Q9HAW0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.83■■□□□ 1.09
BRF2Q9HAW0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
BRF2Q9HAW0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BRF2Q9HAW0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.83■■□□□ 1.08
BRF2Q9HAW0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.83■■□□□ 1.08
BRF2Q9HAW0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 KRT8P33-201ENST00000508125 1423 ntBASIC21.82■■□□□ 1.08
BRF2Q9HAW0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.82■■□□□ 1.08
BRF2Q9HAW0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms