Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 AC091060.1-201ENST00000623524 1766 ntBASIC22.29■■□□□ 1.16
SYNDIG1Q9H7V2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNDIG1Q9H7V2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYNDIG1Q9H7V2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.28■■□□□ 1.16
SYNDIG1Q9H7V2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SYNDIG1Q9H7V2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SYNDIG1Q9H7V2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.27■■□□□ 1.16
SYNDIG1Q9H7V2 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.26■■□□□ 1.15
SYNDIG1Q9H7V2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYNDIG1Q9H7V2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.24■■□□□ 1.15
SYNDIG1Q9H7V2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 AC145676.1-201ENST00000514988 2004 ntBASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.23■■□□□ 1.15
SYNDIG1Q9H7V2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNDIG1Q9H7V2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
SYNDIG1Q9H7V2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 RARRES2P6-201ENST00000567333 442 ntBASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 AL355001.2-201ENST00000620617 1191 ntBASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 SYT6-210ENST00000641643 1587 ntBASIC22.2■■□□□ 1.14
SYNDIG1Q9H7V2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 EDA-201ENST00000338901 1233 ntBASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 AF213884.3-201ENST00000563833 479 ntBASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.19■■□□□ 1.14
SYNDIG1Q9H7V2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms