Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MAP1LC3AQ9H492 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 C1orf229-201ENST00000623686 2258 ntBASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MAP1LC3AQ9H492 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 ANOS2P-203ENST00000472227 1816 ntBASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 ECEL1P1-201ENST00000373592 1742 ntBASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MAP1LC3AQ9H492 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MAP1LC3AQ9H492 DUSP8P3-201ENST00000399571 1760 ntBASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MAP1LC3AQ9H492 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 AC021231.2-201ENST00000594613 730 ntBASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
MAP1LC3AQ9H492 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.59■□□□□ 0.25
MAP1LC3AQ9H492 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms