Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.78■■□□□ 1.56
NUCKS1Q9H1E3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 LONRF2P2-201ENST00000439212 571 ntBASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 PVT1_1.1-201ENST00000615125 194 ntBASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NUCKS1Q9H1E3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
NUCKS1Q9H1E3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 AC074183.2-201ENST00000623112 922 ntBASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NUCKS1Q9H1E3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.74■■□□□ 1.55
NUCKS1Q9H1E3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 AL022069.1-201ENST00000568025 1636 ntBASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NUCKS1Q9H1E3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 RARRES2P1-201ENST00000474487 481 ntBASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 AC011551.1-201ENST00000614101 683 ntBASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.72■■□□□ 1.55
NUCKS1Q9H1E3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NUCKS1Q9H1E3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
NUCKS1Q9H1E3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 ANOS2P-203ENST00000472227 1816 ntBASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
NUCKS1Q9H1E3 KRT8P33-201ENST00000508125 1423 ntBASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 AC092068.2-201ENST00000590491 1708 ntBASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NUCKS1Q9H1E3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.68■■□□□ 1.54
NUCKS1Q9H1E3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
NUCKS1Q9H1E3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms