Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 DUX4L19-201ENST00000557448 1267 ntBASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 AC133561.4-201ENST00000566112 224 ntBASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB1BQ9H0U4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 PBX2P1-201ENST00000493219 1291 ntBASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB1BQ9H0U4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 HLA-L-211ENST00000482052 1765 ntBASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 AP003733.4-201ENST00000623785 1697 ntBASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1BQ9H0U4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 UNC93B3-201ENST00000308076 687 ntBASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 AC005837.3-201ENST00000612163 286 ntBASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1BQ9H0U4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 AC106739.1-201ENST00000617035 715 ntBASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1BQ9H0U4 AC022211.4-201ENST00000625094 2161 ntBASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 AL136162.1-201ENST00000607711 1078 ntBASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB1BQ9H0U4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB1BQ9H0U4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB1BQ9H0U4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB1BQ9H0U4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.33■□□□□ 0.69
RAB1BQ9H0U4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB1BQ9H0U4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
RAB1BQ9H0U4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 AC135279.3-201ENST00000610945 1311 ntBASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB1BQ9H0U4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms