Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNTNAP3Q9BZ76 TSPY26P-201ENST00000476365 1326 ntBASIC21.96■■□□□ 1.11
CNTNAP3Q9BZ76 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP3Q9BZ76 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.96■■□□□ 1.11
CNTNAP3Q9BZ76 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 FAM201B-201ENST00000458407 597 ntBASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 KRT18P6-201ENST00000555540 1265 ntBASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 MIR4651-201ENST00000582622 73 ntBASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 AC087239.1-201ENST00000622671 572 ntBASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP3Q9BZ76 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 AC016769.1-201ENST00000409132 1010 ntBASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP3Q9BZ76 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP3Q9BZ76 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP3Q9BZ76 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 TERF1P2-201ENST00000583350 1212 ntBASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CNTNAP3Q9BZ76 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNTNAP3Q9BZ76 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CNTNAP3Q9BZ76 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNTNAP3Q9BZ76 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CNTNAP3Q9BZ76 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.89■■□□□ 1.09
CNTNAP3Q9BZ76 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CNTNAP3Q9BZ76 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNTNAP3Q9BZ76 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 AC137761.2-201ENST00000561729 223 ntBASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 AC145350.3-201ENST00000569033 163 ntBASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3Q9BZ76 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 AC005703.6-201ENST00000623265 1329 ntBASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 GPX1P1-201ENST00000388829 606 ntBASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 AC012414.1-201ENST00000556676 535 ntBASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3Q9BZ76 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CNTNAP3Q9BZ76 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.86■■□□□ 1.09
CNTNAP3Q9BZ76 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP3Q9BZ76 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms