Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
HDHD3Q9BSH5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDHD3Q9BSH5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
HDHD3Q9BSH5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDHD3Q9BSH5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
HDHD3Q9BSH5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HDHD3Q9BSH5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HDHD3Q9BSH5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 AC087393.1-201ENST00000582896 145 ntBASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HDHD3Q9BSH5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 AL592295.1-201ENST00000400984 884 ntBASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 DUX4L9-201ENST00000449051 1259 ntBASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDHD3Q9BSH5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDHD3Q9BSH5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 MIR6765-201ENST00000614092 87 ntBASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDHD3Q9BSH5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDHD3Q9BSH5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDHD3Q9BSH5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms