Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
FERD3LQ96RJ6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.33■■□□□ 1.17
FERD3LQ96RJ6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.33■■□□□ 1.17
FERD3LQ96RJ6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FERD3LQ96RJ6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FERD3LQ96RJ6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
FERD3LQ96RJ6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FERD3LQ96RJ6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 LINC00543-201ENST00000567234 1845 ntBASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 AC141586.4-201ENST00000624558 1573 ntBASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FERD3LQ96RJ6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 AC005703.6-201ENST00000623265 1329 ntBASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
FERD3LQ96RJ6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
FERD3LQ96RJ6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 AL356740.2-201ENST00000601559 647 ntBASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.26■■□□□ 1.15
FERD3LQ96RJ6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 AL117332.1-201ENST00000622628 974 ntBASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FERD3LQ96RJ6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.24■■□□□ 1.15
FERD3LQ96RJ6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms