Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MS4A4EQ96PG1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MS4A4EQ96PG1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MS4A4EQ96PG1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.33■■□□□ 1.01
MS4A4EQ96PG1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.33■■□□□ 1.01
MS4A4EQ96PG1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
MS4A4EQ96PG1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.33■■□□□ 1
MS4A4EQ96PG1 ALDH1A3-203ENST00000557963 1670 ntBASIC21.33■■□□□ 1
MS4A4EQ96PG1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.33■■□□□ 1
MS4A4EQ96PG1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.32■■□□□ 1
MS4A4EQ96PG1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MS4A4EQ96PG1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MS4A4EQ96PG1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MS4A4EQ96PG1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.32■■□□□ 1
MS4A4EQ96PG1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.32■■□□□ 1
MS4A4EQ96PG1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MS4A4EQ96PG1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.32■■□□□ 1
MS4A4EQ96PG1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A4EQ96PG1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.31■■□□□ 1
MS4A4EQ96PG1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
MS4A4EQ96PG1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.31■■□□□ 1
MS4A4EQ96PG1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A4EQ96PG1 AC004448.1-201ENST00000458332 883 ntBASIC21.31■■□□□ 1
MS4A4EQ96PG1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.31■■□□□ 1
MS4A4EQ96PG1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A4EQ96PG1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.31■■□□□ 1
MS4A4EQ96PG1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MS4A4EQ96PG1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.3■■□□□ 1
MS4A4EQ96PG1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.3■■□□□ 1
MS4A4EQ96PG1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 AC137630.3-201ENST00000607245 391 ntBASIC21.29■■□□□ 1
MS4A4EQ96PG1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.29■■□□□ 1
MS4A4EQ96PG1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MS4A4EQ96PG1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.28■■□□□ 1
MS4A4EQ96PG1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
MS4A4EQ96PG1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MS4A4EQ96PG1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.28■■□□□ 1
MS4A4EQ96PG1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.27■■□□□ 1
MS4A4EQ96PG1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
MS4A4EQ96PG1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.27■■□□□ 1
MS4A4EQ96PG1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.27■■□□□ 1
MS4A4EQ96PG1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.27■■□□□ 1
MS4A4EQ96PG1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
MS4A4EQ96PG1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.27■■□□□ 1
MS4A4EQ96PG1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.27■□□□□ 0.99
MS4A4EQ96PG1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.26■□□□□ 0.99
MS4A4EQ96PG1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MS4A4EQ96PG1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.25■□□□□ 0.99
MS4A4EQ96PG1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 BX664725.1-201ENST00000438252 379 ntBASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.24■□□□□ 0.99
MS4A4EQ96PG1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms