Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LINC00052Q96N35 ZNRF2P2-203ENST00000454624 420 ntBASIC18.77■□□□□ 0.6
LINC00052Q96N35 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
LINC00052Q96N35 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LINC00052Q96N35 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINC00052Q96N35 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC00052Q96N35 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINC00052Q96N35 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINC00052Q96N35 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINC00052Q96N35 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00052Q96N35 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00052Q96N35 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00052Q96N35 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC00052Q96N35 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00052Q96N35 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC00052Q96N35 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00052Q96N35 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 DUX4L11-201ENST00000611504 1267 ntBASIC18.74■□□□□ 0.59
LINC00052Q96N35 DUX4L12-201ENST00000614593 1267 ntBASIC18.74■□□□□ 0.59
LINC00052Q96N35 DUX4L14-201ENST00000621227 1267 ntBASIC18.74■□□□□ 0.59
LINC00052Q96N35 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00052Q96N35 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00052Q96N35 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC00052Q96N35 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00052Q96N35 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00052Q96N35 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L13-201ENST00000554103 1267 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L15-201ENST00000611059 1267 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L23-201ENST00000615195 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L24-201ENST00000617576 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L22-201ENST00000618238 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L20-201ENST00000619712 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L21-201ENST00000622058 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L10-201ENST00000622460 1267 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 DUX4L25-201ENST00000624915 1269 ntBASIC18.73■□□□□ 0.59
LINC00052Q96N35 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00052Q96N35 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00052Q96N35 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00052Q96N35 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00052Q96N35 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00052Q96N35 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00052Q96N35 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC00052Q96N35 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00052Q96N35 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LINC00052Q96N35 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00052Q96N35 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00052Q96N35 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LINC00052Q96N35 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC00052Q96N35 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00052Q96N35 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 ABHD17AP4-201ENST00000411545 909 ntBASIC18.71■□□□□ 0.59
LINC00052Q96N35 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00052Q96N35 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC00052Q96N35 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00052Q96N35 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINC00052Q96N35 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00052Q96N35 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC00052Q96N35 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LINC00052Q96N35 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC00052Q96N35 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC00052Q96N35 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00052Q96N35 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms