Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AC092171.4-201ENST00000609130 632 ntBASIC30.51■■■□□ 2.47
NBPF4Q96M43 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.51■■■□□ 2.47
NBPF4Q96M43 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.51■■■□□ 2.47
NBPF4Q96M43 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
NBPF4Q96M43 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NBPF4Q96M43 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NBPF4Q96M43 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.5■■■□□ 2.47
NBPF4Q96M43 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.5■■■□□ 2.47
NBPF4Q96M43 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
NBPF4Q96M43 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.5■■■□□ 2.47
NBPF4Q96M43 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.5■■■□□ 2.47
NBPF4Q96M43 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NBPF4Q96M43 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
NBPF4Q96M43 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.49■■■□□ 2.47
NBPF4Q96M43 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.49■■■□□ 2.47
NBPF4Q96M43 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
NBPF4Q96M43 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NBPF4Q96M43 C17orf82-201ENST00000623772 1530 ntBASIC30.48■■■□□ 2.47
NBPF4Q96M43 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NBPF4Q96M43 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.48■■■□□ 2.47
NBPF4Q96M43 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
NBPF4Q96M43 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC30.48■■■□□ 2.47
NBPF4Q96M43 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NBPF4Q96M43 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NBPF4Q96M43 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NBPF4Q96M43 CA15P2-201ENST00000611168 834 ntBASIC30.47■■■□□ 2.47
NBPF4Q96M43 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.46■■■□□ 2.47
NBPF4Q96M43 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
NBPF4Q96M43 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NBPF4Q96M43 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.46■■■□□ 2.47
NBPF4Q96M43 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NBPF4Q96M43 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
NBPF4Q96M43 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.45■■■□□ 2.47
NBPF4Q96M43 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.45■■■□□ 2.47
NBPF4Q96M43 RASA4CP-201ENST00000424092 1398 ntBASIC30.45■■■□□ 2.47
NBPF4Q96M43 AC011298.3-201ENST00000615796 283 ntBASIC30.45■■■□□ 2.47
NBPF4Q96M43 AC145676.1-201ENST00000514988 2004 ntBASIC30.45■■■□□ 2.46
NBPF4Q96M43 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.45■■■□□ 2.46
NBPF4Q96M43 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NBPF4Q96M43 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NBPF4Q96M43 MIR5787-201ENST00000611784 55 ntBASIC30.44■■■□□ 2.46
NBPF4Q96M43 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NBPF4Q96M43 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NBPF4Q96M43 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.44■■■□□ 2.46
NBPF4Q96M43 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.43■■■□□ 2.46
NBPF4Q96M43 AC006455.2-201ENST00000429931 906 ntBASIC30.43■■■□□ 2.46
NBPF4Q96M43 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.43■■■□□ 2.46
NBPF4Q96M43 AL138724.1-201ENST00000606771 1088 ntBASIC30.43■■■□□ 2.46
NBPF4Q96M43 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NBPF4Q96M43 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
NBPF4Q96M43 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF4Q96M43 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
NBPF4Q96M43 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.42■■■□□ 2.46
NBPF4Q96M43 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.42■■■□□ 2.46
NBPF4Q96M43 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.42■■■□□ 2.46
NBPF4Q96M43 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NBPF4Q96M43 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.41■■■□□ 2.46
NBPF4Q96M43 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
NBPF4Q96M43 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
NBPF4Q96M43 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NBPF4Q96M43 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
NBPF4Q96M43 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
NBPF4Q96M43 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NBPF4Q96M43 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF4Q96M43 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF4Q96M43 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF4Q96M43 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.4■■■□□ 2.46
NBPF4Q96M43 AC008764.7-201ENST00000593779 1081 ntBASIC30.4■■■□□ 2.46
NBPF4Q96M43 MIR6821-201ENST00000617625 74 ntBASIC30.4■■■□□ 2.46
NBPF4Q96M43 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF4Q96M43 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NBPF4Q96M43 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NBPF4Q96M43 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
NBPF4Q96M43 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.39■■■□□ 2.46
NBPF4Q96M43 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
NBPF4Q96M43 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NBPF4Q96M43 AC027682.1-201ENST00000562846 899 ntBASIC30.38■■■□□ 2.45
NBPF4Q96M43 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.38■■■□□ 2.45
NBPF4Q96M43 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.38■■■□□ 2.45
NBPF4Q96M43 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.38■■■□□ 2.45
NBPF4Q96M43 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.38■■■□□ 2.45
NBPF4Q96M43 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NBPF4Q96M43 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NBPF4Q96M43 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.37■■■□□ 2.45
NBPF4Q96M43 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.37■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms