Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCD2Q92925 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SMARCD2Q92925 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SMARCD2Q92925 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCD2Q92925 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.73■■□□□ 1.39
SMARCD2Q92925 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SMARCD2Q92925 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SMARCD2Q92925 C17orf82-201ENST00000623772 1530 ntBASIC23.73■■□□□ 1.39
SMARCD2Q92925 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCD2Q92925 AC027682.1-201ENST00000562846 899 ntBASIC23.72■■□□□ 1.39
SMARCD2Q92925 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SMARCD2Q92925 AC241377.3-202ENST00000626088 1088 ntBASIC23.72■■□□□ 1.39
SMARCD2Q92925 AC241585.3-202ENST00000628937 1088 ntBASIC23.72■■□□□ 1.39
SMARCD2Q92925 AC245100.8-202ENST00000629247 1058 ntBASIC23.72■■□□□ 1.39
SMARCD2Q92925 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.72■■□□□ 1.39
SMARCD2Q92925 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCD2Q92925 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCD2Q92925 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 AC104564.3-201ENST00000582367 638 ntBASIC23.71■■□□□ 1.39
SMARCD2Q92925 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.71■■□□□ 1.39
SMARCD2Q92925 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SMARCD2Q92925 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
SMARCD2Q92925 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SMARCD2Q92925 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.7■■□□□ 1.38
SMARCD2Q92925 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCD2Q92925 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCD2Q92925 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SMARCD2Q92925 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCD2Q92925 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCD2Q92925 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.7■■□□□ 1.38
SMARCD2Q92925 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCD2Q92925 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCD2Q92925 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.69■■□□□ 1.38
SMARCD2Q92925 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCD2Q92925 AC008764.7-201ENST00000593779 1081 ntBASIC23.69■■□□□ 1.38
SMARCD2Q92925 MIR6821-201ENST00000617625 74 ntBASIC23.69■■□□□ 1.38
SMARCD2Q92925 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCD2Q92925 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCD2Q92925 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCD2Q92925 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCD2Q92925 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCD2Q92925 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCD2Q92925 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SMARCD2Q92925 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCD2Q92925 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.68■■□□□ 1.38
SMARCD2Q92925 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCD2Q92925 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCD2Q92925 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SMARCD2Q92925 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMARCD2Q92925 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SMARCD2Q92925 AC136469.2-201ENST00000623944 1028 ntBASIC23.67■■□□□ 1.38
SMARCD2Q92925 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCD2Q92925 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCD2Q92925 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.66■■□□□ 1.38
SMARCD2Q92925 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 AC097381.1-201ENST00000429019 1296 ntBASIC23.66■■□□□ 1.38
SMARCD2Q92925 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SMARCD2Q92925 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCD2Q92925 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SMARCD2Q92925 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCD2Q92925 AC099791.1-201ENST00000416440 715 ntBASIC23.65■■□□□ 1.38
SMARCD2Q92925 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCD2Q92925 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.65■■□□□ 1.38
SMARCD2Q92925 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCD2Q92925 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCD2Q92925 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SMARCD2Q92925 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCD2Q92925 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
SMARCD2Q92925 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCD2Q92925 AC145676.1-201ENST00000514988 2004 ntBASIC23.64■■□□□ 1.38
SMARCD2Q92925 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCD2Q92925 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCD2Q92925 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCD2Q92925 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 AC091060.1-201ENST00000623524 1766 ntBASIC23.64■■□□□ 1.37
SMARCD2Q92925 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCD2Q92925 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
SMARCD2Q92925 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SMARCD2Q92925 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms